Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb7Q8CDY9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Gm37444-201ENSMUST00000193605 439 ntBASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb7Q8CDY9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb7Q8CDY9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb7Q8CDY9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb7Q8CDY9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb7Q8CDY9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms