Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lysmd4Q8CC84 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Lysmd4Q8CC84 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lysmd4Q8CC84 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lysmd4Q8CC84 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Lysmd4Q8CC84 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
Lysmd4Q8CC84 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd4Q8CC84 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Gm18671-201ENSMUST00000214826 683 ntBASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd4Q8CC84 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Mir2861-201ENSMUST00000175539 82 ntBASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Gm7514-201ENSMUST00000209475 934 ntBASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Zfp783-201ENSMUST00000095946 670 ntBASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd4Q8CC84 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Gm13401-201ENSMUST00000117074 291 ntBASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.55■□□□□ 0.08
Lysmd4Q8CC84 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms