Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.78■□□□□ 0.28
SynpoQ8CC35 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.78■□□□□ 0.28
SynpoQ8CC35 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SynpoQ8CC35 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SynpoQ8CC35 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.77■□□□□ 0.27
SynpoQ8CC35 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SynpoQ8CC35 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Gm38285-201ENSMUST00000192928 922 ntBASIC16.76■□□□□ 0.27
SynpoQ8CC35 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SynpoQ8CC35 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Gm15375-201ENSMUST00000119510 849 ntBASIC16.75■□□□□ 0.27
SynpoQ8CC35 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SynpoQ8CC35 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Gm15565-201ENSMUST00000118890 427 ntBASIC16.74■□□□□ 0.27
SynpoQ8CC35 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SynpoQ8CC35 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SynpoQ8CC35 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms