Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx6Q8C7R7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Flg-201ENSMUST00000050758 1488 ntBASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx6Q8C7R7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rfx6Q8C7R7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx6Q8C7R7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rfx6Q8C7R7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rfx6Q8C7R7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx6Q8C7R7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms