Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nek11Q8C0Q4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nek11Q8C0Q4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Nek11Q8C0Q4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Gm17661-201ENSMUST00000170317 270 ntBASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek11Q8C0Q4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Gm7638-201ENSMUST00000121348 967 ntBASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek11Q8C0Q4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek11Q8C0Q4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek11Q8C0Q4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms