Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cc2d1bQ8BRN9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Cc2d1bQ8BRN9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cc2d1bQ8BRN9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Gm11643-201ENSMUST00000119578 864 ntBASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cc2d1bQ8BRN9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cc2d1bQ8BRN9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Gm12527-201ENSMUST00000117967 564 ntBASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Gm29257-201ENSMUST00000186115 639 ntBASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cc2d1bQ8BRN9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cc2d1bQ8BRN9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms