Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rab11fip4Q8BQP8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Gm18025-201ENSMUST00000221733 862 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rab11fip4Q8BQP8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rab11fip4Q8BQP8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Mir2861-201ENSMUST00000175539 82 ntBASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Gm42545-201ENSMUST00000202755 922 ntBASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rab11fip4Q8BQP8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rab11fip4Q8BQP8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab11fip4Q8BQP8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms