Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Gm12896-201ENSMUST00000118430 226 ntBASIC17.12■□□□□ 0.33
Q8BP99 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Q8BP99 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Q8BP99 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.11■□□□□ 0.33
Q8BP99 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.11■□□□□ 0.33
Q8BP99 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.11■□□□□ 0.33
Q8BP99 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q8BP99 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.11■□□□□ 0.33
Q8BP99 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q8BP99 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Q8BP99 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Q8BP99 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.1■□□□□ 0.33
Q8BP99 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.1■□□□□ 0.33
Q8BP99 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Q8BP99 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Q8BP99 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
Q8BP99 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8BP99 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.1■□□□□ 0.33
Q8BP99 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q8BP99 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Q8BP99 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Gm22240-201ENSMUST00000175225 82 ntBASIC17.09■□□□□ 0.33
Q8BP99 Gm27275-201ENSMUST00000184318 272 ntBASIC17.09■□□□□ 0.33
Q8BP99 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.09■□□□□ 0.33
Q8BP99 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.09■□□□□ 0.33
Q8BP99 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.09■□□□□ 0.33
Q8BP99 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Q8BP99 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.09■□□□□ 0.33
Q8BP99 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.09■□□□□ 0.33
Q8BP99 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q8BP99 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8BP99 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q8BP99 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.08■□□□□ 0.33
Q8BP99 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Q8BP99 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.08■□□□□ 0.32
Q8BP99 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q8BP99 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Q8BP99 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Q8BP99 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.07■□□□□ 0.32
Q8BP99 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.07■□□□□ 0.32
Q8BP99 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.07■□□□□ 0.32
Q8BP99 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.07■□□□□ 0.32
Q8BP99 Gm13168-201ENSMUST00000121771 632 ntBASIC17.07■□□□□ 0.32
Q8BP99 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Q8BP99 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8BP99 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q8BP99 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8BP99 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms