Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdhr3Q8BL00 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdhr3Q8BL00 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Gm13401-201ENSMUST00000117074 291 ntBASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdhr3Q8BL00 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Gm26524-201ENSMUST00000192339 390 ntBASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdhr3Q8BL00 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdhr3Q8BL00 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Gm13148-201ENSMUST00000118892 745 ntBASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdhr3Q8BL00 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms