Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdh20Q8BIZ0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pcdh20Q8BIZ0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh20Q8BIZ0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdh20Q8BIZ0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdh20Q8BIZ0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdh20Q8BIZ0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh20Q8BIZ0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Gm11249-201ENSMUST00000117071 859 ntBASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Gm18666-201ENSMUST00000190039 958 ntBASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh20Q8BIZ0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh20Q8BIZ0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms