Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SynbQ8BI41 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
SynbQ8BI41 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SynbQ8BI41 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SynbQ8BI41 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SynbQ8BI41 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SynbQ8BI41 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SynbQ8BI41 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SynbQ8BI41 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.54■□□□□ 0.24
SynbQ8BI41 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.54■□□□□ 0.24
SynbQ8BI41 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SynbQ8BI41 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.54■□□□□ 0.24
SynbQ8BI41 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SynbQ8BI41 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SynbQ8BI41 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.53■□□□□ 0.24
SynbQ8BI41 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SynbQ8BI41 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SynbQ8BI41 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SynbQ8BI41 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SynbQ8BI41 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SynbQ8BI41 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SynbQ8BI41 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SynbQ8BI41 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SynbQ8BI41 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.52■□□□□ 0.24
SynbQ8BI41 Gm10819-201ENSMUST00000099988 561 ntBASIC16.52■□□□□ 0.24
SynbQ8BI41 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SynbQ8BI41 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SynbQ8BI41 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SynbQ8BI41 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.52■□□□□ 0.23
SynbQ8BI41 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SynbQ8BI41 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.52■□□□□ 0.23
SynbQ8BI41 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SynbQ8BI41 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.51■□□□□ 0.23
SynbQ8BI41 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Gm7367-201ENSMUST00000057611 492 ntBASIC16.51■□□□□ 0.23
SynbQ8BI41 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SynbQ8BI41 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SynbQ8BI41 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.51■□□□□ 0.23
SynbQ8BI41 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.51■□□□□ 0.23
SynbQ8BI41 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms