Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc5a7Q8BGY9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Gm13534-201ENSMUST00000121169 513 ntBASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Mir8112-201ENSMUST00000184382 131 ntBASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.26■□□□□ 0.03
Slc5a7Q8BGY9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slc5a7Q8BGY9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Slc5a7Q8BGY9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc5a7Q8BGY9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms