Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim23Q8BGX0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Gm7638-201ENSMUST00000121348 967 ntBASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Gm37025-201ENSMUST00000195159 829 ntBASIC16.74■□□□□ 0.27
Trim23Q8BGX0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.74■□□□□ 0.27
Trim23Q8BGX0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim23Q8BGX0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm27463-201ENSMUST00000183569 57 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Gm43799-201ENSMUST00000201845 579 ntBASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Trim23Q8BGX0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim23Q8BGX0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim23Q8BGX0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim23Q8BGX0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms