Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Npas4Q8BGD7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Gm45328-201ENSMUST00000210942 917 ntBASIC18.31■□□□□ 0.52
Npas4Q8BGD7 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Npas4Q8BGD7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.3■□□□□ 0.52
Npas4Q8BGD7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Npas4Q8BGD7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.28■□□□□ 0.52
Npas4Q8BGD7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Npas4Q8BGD7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Npas4Q8BGD7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Npas4Q8BGD7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Npas4Q8BGD7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Npas4Q8BGD7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms