Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lrrtm4Q80XG9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Lrrtm4Q80XG9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.91■□□□□ 0.3
Lrrtm4Q80XG9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lrrtm4Q80XG9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.89■□□□□ 0.3
Lrrtm4Q80XG9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lrrtm4Q80XG9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lrrtm4Q80XG9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lrrtm4Q80XG9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms