Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Ccdc116Q80X53 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17■□□□□ 0.31
Ccdc116Q80X53 Gm37292-201ENSMUST00000192062 758 ntBASIC17■□□□□ 0.31
Ccdc116Q80X53 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc116Q80X53 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc116Q80X53 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Gm29257-201ENSMUST00000186115 639 ntBASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Trmt13-210ENSMUST00000198454 880 ntBASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc116Q80X53 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.97■□□□□ 0.31
Ccdc116Q80X53 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc116Q80X53 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc116Q80X53 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc116Q80X53 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Ccdc116Q80X53 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.96■□□□□ 0.3
Ccdc116Q80X53 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.95■□□□□ 0.3
Ccdc116Q80X53 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc116Q80X53 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms