Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Srrm3Q80WV7 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Gm37856-201ENSMUST00000191634 999 ntBASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Srrm3Q80WV7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Srrm3Q80WV7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.08■□□□□ 0.49
Srrm3Q80WV7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Srrm3Q80WV7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Srrm3Q80WV7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Gm13148-201ENSMUST00000118892 745 ntBASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Srrm3Q80WV7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Srrm3Q80WV7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Srrm3Q80WV7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms