Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.79■□□□□ 0.28
Trim36Q80WG7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim36Q80WG7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim36Q80WG7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.77■□□□□ 0.28
Trim36Q80WG7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim36Q80WG7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim36Q80WG7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim36Q80WG7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim36Q80WG7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim36Q80WG7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim36Q80WG7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim36Q80WG7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gm12896-201ENSMUST00000118430 226 ntBASIC16.75■□□□□ 0.27
Trim36Q80WG7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.75■□□□□ 0.27
Trim36Q80WG7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim36Q80WG7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.74■□□□□ 0.27
Trim36Q80WG7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim36Q80WG7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms