Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnrc18Q80WC3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnrc18Q80WC3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tnrc18Q80WC3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnrc18Q80WC3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Gm5364-201ENSMUST00000216789 889 ntBASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnrc18Q80WC3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Gm11336-201ENSMUST00000118168 334 ntBASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnrc18Q80WC3 Idnk-204ENSMUST00000226010 1898 ntBASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnrc18Q80WC3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gm1401-201ENSMUST00000122048 772 ntBASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnrc18Q80WC3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms