Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sh3tc2Q80VA5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sh3tc2Q80VA5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
Sh3tc2Q80VA5 Rarb-207ENSMUST00000225921 2756 ntBASIC18.92■□□□□ 0.62
Sh3tc2Q80VA5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Gm16061-201ENSMUST00000122167 857 ntBASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh3tc2Q80VA5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Gm27704-201ENSMUST00000185094 107 ntBASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Sh3tc2Q80VA5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Sh3tc2Q80VA5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh3tc2Q80VA5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3tc2Q80VA5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3tc2Q80VA5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Fst-202ENSMUST00000223640 2612 ntBASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sh3tc2Q80VA5 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Gm21559-201ENSMUST00000220638 855 ntBASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3tc2Q80VA5 Gm8587-201ENSMUST00000076538 843 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms