Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh19Q80TF3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh19Q80TF3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh19Q80TF3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh19Q80TF3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh19Q80TF3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh19Q80TF3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh19Q80TF3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms