Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn4bQ7M729 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.92■□□□□ 0.3
Scn4bQ7M729 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn4bQ7M729 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Gm5643-201ENSMUST00000117081 966 ntBASIC16.91■□□□□ 0.3
Scn4bQ7M729 Gm8520-201ENSMUST00000186517 868 ntBASIC16.91■□□□□ 0.3
Scn4bQ7M729 Gm37292-201ENSMUST00000192062 758 ntBASIC16.91■□□□□ 0.3
Scn4bQ7M729 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn4bQ7M729 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Scn4bQ7M729 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn4bQ7M729 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.9■□□□□ 0.3
Scn4bQ7M729 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn4bQ7M729 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn4bQ7M729 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn4bQ7M729 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Gm13168-201ENSMUST00000121771 632 ntBASIC16.89■□□□□ 0.29
Scn4bQ7M729 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn4bQ7M729 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.89■□□□□ 0.29
Scn4bQ7M729 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.88■□□□□ 0.29
Scn4bQ7M729 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn4bQ7M729 Gm12382-201ENSMUST00000122005 922 ntBASIC16.88■□□□□ 0.29
Scn4bQ7M729 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms