Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Gm6211-202ENSMUST00000167849 925 ntBASIC14.18□□□□□ -0.14
Vma21Q78T54 Gm7291-201ENSMUST00000199147 382 ntBASIC14.18□□□□□ -0.14
Vma21Q78T54 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vma21Q78T54 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.18□□□□□ -0.14
Vma21Q78T54 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vma21Q78T54 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vma21Q78T54 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.17□□□□□ -0.14
Vma21Q78T54 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.17□□□□□ -0.14
Vma21Q78T54 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.17□□□□□ -0.14
Vma21Q78T54 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vma21Q78T54 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.16□□□□□ -0.14
Vma21Q78T54 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.16□□□□□ -0.14
Vma21Q78T54 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.16□□□□□ -0.14
Vma21Q78T54 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.16□□□□□ -0.14
Vma21Q78T54 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vma21Q78T54 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vma21Q78T54 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Vma21Q78T54 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Flg-201ENSMUST00000050758 1488 ntBASIC14.15□□□□□ -0.14
Vma21Q78T54 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Vma21Q78T54 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vma21Q78T54 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vma21Q78T54 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vma21Q78T54 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vma21Q78T54 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vma21Q78T54 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Vma21Q78T54 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Gm44549-201ENSMUST00000208351 577 ntBASIC14.14□□□□□ -0.15
Vma21Q78T54 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Zfp783-201ENSMUST00000095946 670 ntBASIC14.14□□□□□ -0.15
Vma21Q78T54 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.14□□□□□ -0.15
Vma21Q78T54 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vma21Q78T54 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vma21Q78T54 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.14□□□□□ -0.15
Vma21Q78T54 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vma21Q78T54 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms