Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg5Q71M36 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cspg5Q71M36 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18■□□□□ 0.47
Cspg5Q71M36 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cspg5Q71M36 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cspg5Q71M36 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg5Q71M36 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18■□□□□ 0.47
Cspg5Q71M36 Gm44544-201ENSMUST00000207052 1844 ntBASIC18■□□□□ 0.47
Cspg5Q71M36 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cspg5Q71M36 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Mir5130-201ENSMUST00000175160 84 ntBASIC17.99■□□□□ 0.47
Cspg5Q71M36 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Gm10517-202ENSMUST00000192970 758 ntBASIC17.99■□□□□ 0.47
Cspg5Q71M36 Gm33142-201ENSMUST00000193913 867 ntBASIC17.99■□□□□ 0.47
Cspg5Q71M36 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cspg5Q71M36 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cspg5Q71M36 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cspg5Q71M36 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.97■□□□□ 0.47
Cspg5Q71M36 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cspg5Q71M36 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.97■□□□□ 0.47
Cspg5Q71M36 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.97■□□□□ 0.47
Cspg5Q71M36 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.97■□□□□ 0.47
Cspg5Q71M36 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Mir6349-201ENSMUST00000184059 97 ntBASIC17.96■□□□□ 0.47
Cspg5Q71M36 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cspg5Q71M36 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Gm27463-201ENSMUST00000183569 57 ntBASIC17.95■□□□□ 0.46
Cspg5Q71M36 Gm45058-201ENSMUST00000205810 766 ntBASIC17.95■□□□□ 0.46
Cspg5Q71M36 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.95■□□□□ 0.46
Cspg5Q71M36 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cspg5Q71M36 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.94■□□□□ 0.46
Cspg5Q71M36 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.94■□□□□ 0.46
Cspg5Q71M36 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cspg5Q71M36 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms