Protein–RNA interactions for Protein: Q715T0

Nme8, Thioredoxin domain-containing protein 3, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nme8Q715T0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nme8Q715T0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nme8Q715T0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Nme8Q715T0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.56■□□□□ 0.88
Nme8Q715T0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.56■□□□□ 0.88
Nme8Q715T0 Gm18101-201ENSMUST00000215769 548 ntBASIC20.56■□□□□ 0.88
Nme8Q715T0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.56■□□□□ 0.88
Nme8Q715T0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nme8Q715T0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.55■□□□□ 0.88
Nme8Q715T0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nme8Q715T0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nme8Q715T0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nme8Q715T0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nme8Q715T0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nme8Q715T0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.54■□□□□ 0.88
Nme8Q715T0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nme8Q715T0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.54■□□□□ 0.88
Nme8Q715T0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nme8Q715T0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nme8Q715T0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nme8Q715T0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.53■□□□□ 0.88
Nme8Q715T0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.53■□□□□ 0.88
Nme8Q715T0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.53■□□□□ 0.88
Nme8Q715T0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.53■□□□□ 0.88
Nme8Q715T0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nme8Q715T0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.53■□□□□ 0.88
Nme8Q715T0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nme8Q715T0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nme8Q715T0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nme8Q715T0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nme8Q715T0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.52■□□□□ 0.88
Nme8Q715T0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.52■□□□□ 0.88
Nme8Q715T0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nme8Q715T0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nme8Q715T0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nme8Q715T0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nme8Q715T0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nme8Q715T0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nme8Q715T0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nme8Q715T0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nme8Q715T0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nme8Q715T0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.5■□□□□ 0.87
Nme8Q715T0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.5■□□□□ 0.87
Nme8Q715T0 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.5■□□□□ 0.87
Nme8Q715T0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nme8Q715T0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nme8Q715T0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nme8Q715T0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.5■□□□□ 0.87
Nme8Q715T0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nme8Q715T0 Gm21559-201ENSMUST00000220638 855 ntBASIC20.5■□□□□ 0.87
Nme8Q715T0 Gm8587-201ENSMUST00000076538 843 ntBASIC20.5■□□□□ 0.87
Nme8Q715T0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Nme8Q715T0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Nme8Q715T0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Gm23634-201ENSMUST00000175071 91 ntBASIC20.49■□□□□ 0.87
Nme8Q715T0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.49■□□□□ 0.87
Nme8Q715T0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nme8Q715T0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.48■□□□□ 0.87
Nme8Q715T0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nme8Q715T0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms