Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.04■□□□□ 0.96
Sned1Q70E20 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Notumos-201ENSMUST00000151998 2659 ntBASIC21.04■□□□□ 0.96
Sned1Q70E20 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.04■□□□□ 0.96
Sned1Q70E20 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.04■□□□□ 0.96
Sned1Q70E20 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sned1Q70E20 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sned1Q70E20 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Sned1Q70E20 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
Sned1Q70E20 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Gm13312-201ENSMUST00000119631 718 ntBASIC21.03■□□□□ 0.96
Sned1Q70E20 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.03■□□□□ 0.96
Sned1Q70E20 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sned1Q70E20 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC21.02■□□□□ 0.96
Sned1Q70E20 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sned1Q70E20 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.02■□□□□ 0.96
Sned1Q70E20 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sned1Q70E20 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sned1Q70E20 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Sned1Q70E20 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Sned1Q70E20 Gm2213-201ENSMUST00000197485 688 ntBASIC21.02■□□□□ 0.96
Sned1Q70E20 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.02■□□□□ 0.96
Sned1Q70E20 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sned1Q70E20 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sned1Q70E20 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Sned1Q70E20 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sned1Q70E20 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sned1Q70E20 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.01■□□□□ 0.95
Sned1Q70E20 Phf7-203ENSMUST00000226565 1971 ntBASIC21.01■□□□□ 0.95
Sned1Q70E20 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sned1Q70E20 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sned1Q70E20 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Rprl3-201ENSMUST00000157400 290 ntBASIC21.01■□□□□ 0.95
Sned1Q70E20 Gm5264-201ENSMUST00000190584 848 ntBASIC21.01■□□□□ 0.95
Sned1Q70E20 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.01■□□□□ 0.95
Sned1Q70E20 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sned1Q70E20 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sned1Q70E20 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21■□□□□ 0.95
Sned1Q70E20 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sned1Q70E20 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sned1Q70E20 Gm27867-201ENSMUST00000184778 125 ntBASIC21■□□□□ 0.95
Sned1Q70E20 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sned1Q70E20 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sned1Q70E20 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.99■□□□□ 0.95
Sned1Q70E20 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Sned1Q70E20 Idnk-204ENSMUST00000226010 1898 ntBASIC20.99■□□□□ 0.95
Sned1Q70E20 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.99■□□□□ 0.95
Sned1Q70E20 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sned1Q70E20 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.98■□□□□ 0.95
Sned1Q70E20 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sned1Q70E20 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.98■□□□□ 0.95
Sned1Q70E20 Gm43575-201ENSMUST00000196420 516 ntBASIC20.98■□□□□ 0.95
Sned1Q70E20 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.98■□□□□ 0.95
Sned1Q70E20 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sned1Q70E20 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sned1Q70E20 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.97■□□□□ 0.95
Sned1Q70E20 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Gm4995-201ENSMUST00000117247 432 ntBASIC20.97■□□□□ 0.95
Sned1Q70E20 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sned1Q70E20 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sned1Q70E20 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.96■□□□□ 0.95
Sned1Q70E20 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.96■□□□□ 0.95
Sned1Q70E20 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms