Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Mir6956-201ENSMUST00000183598 62 ntBASIC14.63□□□□□ -0.07
Rif1Q6PR54 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rif1Q6PR54 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gm14140-201ENSMUST00000119999 995 ntBASIC14.62□□□□□ -0.07
Rif1Q6PR54 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Mir6977-201ENSMUST00000184960 64 ntBASIC14.62□□□□□ -0.07
Rif1Q6PR54 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.62□□□□□ -0.07
Rif1Q6PR54 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rif1Q6PR54 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Gm25911-201ENSMUST00000157621 56 ntBASIC14.61□□□□□ -0.07
Rif1Q6PR54 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.61□□□□□ -0.07
Rif1Q6PR54 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.61□□□□□ -0.07
Rif1Q6PR54 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rif1Q6PR54 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm4974-201ENSMUST00000209974 875 ntBASIC14.6□□□□□ -0.07
Rif1Q6PR54 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm6296-201ENSMUST00000222599 943 ntBASIC14.6□□□□□ -0.07
Rif1Q6PR54 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Rif1Q6PR54 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rif1Q6PR54 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms