Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Odf3b-204ENSMUST00000227834 930 ntBASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarca1Q6PGB8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Gm7977-201ENSMUST00000193787 748 ntBASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarca1Q6PGB8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Timm23-208ENSMUST00000226683 750 ntBASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarca1Q6PGB8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Gm10418-201ENSMUST00000100943 576 ntBASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarca1Q6PGB8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarca1Q6PGB8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.27■□□□□ 0.67
Smarca1Q6PGB8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarca1Q6PGB8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smarca1Q6PGB8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Gm15565-201ENSMUST00000118890 427 ntBASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Gm13836-201ENSMUST00000121159 501 ntBASIC19.26■□□□□ 0.67
Smarca1Q6PGB8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms