Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Gm6211-202ENSMUST00000167849 925 ntBASIC19.3■□□□□ 0.68
Dhx40Q6PE54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Gm10602-201ENSMUST00000098239 609 ntBASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.3■□□□□ 0.68
Dhx40Q6PE54 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Dhx40Q6PE54 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Gm7290-201ENSMUST00000104990 617 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Gm12918-201ENSMUST00000120234 636 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Gm15710-201ENSMUST00000121821 636 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Gm5075-201ENSMUST00000196916 622 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.28■□□□□ 0.68
Dhx40Q6PE54 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Dhx40Q6PE54 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Dhx40Q6PE54 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Dhx40Q6PE54 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Flg-201ENSMUST00000050758 1488 ntBASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Dhx40Q6PE54 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dhx40Q6PE54 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Dhx40Q6PE54 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Dhx40Q6PE54 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms