Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gm16061-201ENSMUST00000122167 857 ntBASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Prrt3Q6PE13 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Prrt3Q6PE13 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prrt3Q6PE13 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prrt3Q6PE13 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Gm43930-201ENSMUST00000203868 845 ntBASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prrt3Q6PE13 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Gm9731-201ENSMUST00000209480 747 ntBASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prrt3Q6PE13 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Prrt3Q6PE13 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prrt3Q6PE13 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prrt3Q6PE13 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prrt3Q6PE13 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms