Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Kdm3aQ6PCM1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Kdm3aQ6PCM1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Kdm3aQ6PCM1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Gm18101-201ENSMUST00000215769 548 ntBASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Kdm3aQ6PCM1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Kdm3aQ6PCM1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Mir1668-201ENSMUST00000184114 107 ntBASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.92■□□□□ 0.94
Kdm3aQ6PCM1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Kdm3aQ6PCM1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Kdm3aQ6PCM1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Kdm3aQ6PCM1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.89■□□□□ 0.94
Kdm3aQ6PCM1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Gm22697-201ENSMUST00000175194 63 ntBASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Kdm3aQ6PCM1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm3aQ6PCM1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm3aQ6PCM1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm3aQ6PCM1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms