Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Gm12085-201ENSMUST00000119263 940 ntBASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Gm10231-201ENSMUST00000181584 441 ntBASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Gm10175-202ENSMUST00000208752 441 ntBASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl3Q6P1Y1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Gm21814-202ENSMUST00000203277 873 ntBASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Rtl3Q6P1Y1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rtl3Q6P1Y1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rtl3Q6P1Y1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl3Q6P1Y1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtl3Q6P1Y1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl3Q6P1Y1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms