Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Gm13168-201ENSMUST00000121771 632 ntBASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Gm24841-201ENSMUST00000158676 357 ntBASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac4Q6NZM9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac4Q6NZM9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac4Q6NZM9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Hdac4Q6NZM9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Hdac4Q6NZM9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac4Q6NZM9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Hdac4Q6NZM9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hdac4Q6NZM9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms