Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpsf6Q6NVF9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Gm13158-201ENSMUST00000122007 736 ntBASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cpsf6Q6NVF9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cpsf6Q6NVF9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Cpsf6Q6NVF9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cpsf6Q6NVF9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.83■□□□□ 0.28
Cpsf6Q6NVF9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.82■□□□□ 0.28
Cpsf6Q6NVF9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cpsf6Q6NVF9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms