Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col7a1Q63870 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.47□□□□□ -0.09
Col7a1Q63870 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col7a1Q63870 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col7a1Q63870 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col7a1Q63870 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col7a1Q63870 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Gm25990-201ENSMUST00000102440 86 ntBASIC14.46□□□□□ -0.09
Col7a1Q63870 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col7a1Q63870 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col7a1Q63870 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.46□□□□□ -0.09
Col7a1Q63870 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col7a1Q63870 Gm23547-201ENSMUST00000158210 271 ntBASIC14.46□□□□□ -0.09
Col7a1Q63870 Gm43767-201ENSMUST00000198933 381 ntBASIC14.46□□□□□ -0.09
Col7a1Q63870 Gm15590-201ENSMUST00000078419 552 ntBASIC14.46□□□□□ -0.09
Col7a1Q63870 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col7a1Q63870 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col7a1Q63870 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col7a1Q63870 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col7a1Q63870 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col7a1Q63870 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col7a1Q63870 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.45□□□□□ -0.1
Col7a1Q63870 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Col7a1Q63870 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Gm8396-201ENSMUST00000057361 823 ntBASIC14.44□□□□□ -0.1
Col7a1Q63870 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col7a1Q63870 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.44□□□□□ -0.1
Col7a1Q63870 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.44□□□□□ -0.1
Col7a1Q63870 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Col7a1Q63870 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.44□□□□□ -0.1
Col7a1Q63870 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col7a1Q63870 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col7a1Q63870 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col7a1Q63870 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col7a1Q63870 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col7a1Q63870 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col7a1Q63870 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.43□□□□□ -0.1
Col7a1Q63870 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col7a1Q63870 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col7a1Q63870 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.42□□□□□ -0.1
Col7a1Q63870 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Gm6550-201ENSMUST00000187574 993 ntBASIC14.42□□□□□ -0.1
Col7a1Q63870 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.42□□□□□ -0.1
Col7a1Q63870 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col7a1Q63870 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Golph3-205ENSMUST00000228671 2842 ntBASIC14.42□□□□□ -0.1
Col7a1Q63870 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col7a1Q63870 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Col7a1Q63870 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms