Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17■□□□□ 0.31
Six3Q62233 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Six3Q62233 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Six3Q62233 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.99■□□□□ 0.31
Six3Q62233 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.99■□□□□ 0.31
Six3Q62233 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.99■□□□□ 0.31
Six3Q62233 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Six3Q62233 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Six3Q62233 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Six3Q62233 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Six3Q62233 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.98■□□□□ 0.31
Six3Q62233 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Six3Q62233 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.98■□□□□ 0.31
Six3Q62233 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.98■□□□□ 0.31
Six3Q62233 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Mir6349-201ENSMUST00000184059 97 ntBASIC16.98■□□□□ 0.31
Six3Q62233 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.98■□□□□ 0.31
Six3Q62233 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Six3Q62233 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Six3Q62233 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Six3Q62233 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.97■□□□□ 0.31
Six3Q62233 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.97■□□□□ 0.31
Six3Q62233 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Six3Q62233 Gm15375-201ENSMUST00000119510 849 ntBASIC16.97■□□□□ 0.31
Six3Q62233 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.97■□□□□ 0.31
Six3Q62233 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six3Q62233 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six3Q62233 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.97■□□□□ 0.31
Six3Q62233 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Six3Q62233 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.96■□□□□ 0.31
Six3Q62233 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Six3Q62233 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Six3Q62233 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Six3Q62233 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six3Q62233 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.96■□□□□ 0.3
Six3Q62233 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Six3Q62233 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Six3Q62233 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.96■□□□□ 0.3
Six3Q62233 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Six3Q62233 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.95■□□□□ 0.3
Six3Q62233 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Gm27275-201ENSMUST00000184318 272 ntBASIC16.95■□□□□ 0.3
Six3Q62233 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.95■□□□□ 0.3
Six3Q62233 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six3Q62233 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms