Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.5■□□□□ 0.55
Six2Q62232 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six2Q62232 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Six2Q62232 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.49■□□□□ 0.55
Six2Q62232 Gm20760-201ENSMUST00000179197 648 ntBASIC18.49■□□□□ 0.55
Six2Q62232 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Six2Q62232 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Six2Q62232 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six2Q62232 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Six2Q62232 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Six2Q62232 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Six2Q62232 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Six2Q62232 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.47■□□□□ 0.55
Six2Q62232 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.47■□□□□ 0.55
Six2Q62232 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Six2Q62232 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Six2Q62232 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.46■□□□□ 0.55
Six2Q62232 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.46■□□□□ 0.55
Six2Q62232 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.46■□□□□ 0.55
Six2Q62232 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Six2Q62232 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.45■□□□□ 0.54
Six2Q62232 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.45■□□□□ 0.54
Six2Q62232 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Six2Q62232 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Six2Q62232 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Six2Q62232 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Six2Q62232 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.44■□□□□ 0.54
Six2Q62232 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.44■□□□□ 0.54
Six2Q62232 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.44■□□□□ 0.54
Six2Q62232 Gm13168-201ENSMUST00000121771 632 ntBASIC18.44■□□□□ 0.54
Six2Q62232 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Six2Q62232 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Six2Q62232 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Six2Q62232 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Six2Q62232 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms