Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ctr9Q62018 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctr9Q62018 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.47■□□□□ 0.87
Ctr9Q62018 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.46■□□□□ 0.87
Ctr9Q62018 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.46■□□□□ 0.87
Ctr9Q62018 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Gm7791-201ENSMUST00000219066 539 ntBASIC20.46■□□□□ 0.87
Ctr9Q62018 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ctr9Q62018 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctr9Q62018 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.45■□□□□ 0.86
Ctr9Q62018 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.45■□□□□ 0.86
Ctr9Q62018 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.45■□□□□ 0.86
Ctr9Q62018 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctr9Q62018 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.45■□□□□ 0.86
Ctr9Q62018 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Ctr9Q62018 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ctr9Q62018 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.44■□□□□ 0.86
Ctr9Q62018 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ctr9Q62018 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctr9Q62018 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.44■□□□□ 0.86
Ctr9Q62018 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ctr9Q62018 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.43■□□□□ 0.86
Ctr9Q62018 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.43■□□□□ 0.86
Ctr9Q62018 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctr9Q62018 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ctr9Q62018 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ctr9Q62018 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ctr9Q62018 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctr9Q62018 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.41■□□□□ 0.86
Ctr9Q62018 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.41■□□□□ 0.86
Ctr9Q62018 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ctr9Q62018 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.41■□□□□ 0.86
Ctr9Q62018 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctr9Q62018 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ctr9Q62018 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Gm37025-201ENSMUST00000195159 829 ntBASIC20.4■□□□□ 0.86
Ctr9Q62018 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctr9Q62018 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.4■□□□□ 0.86
Ctr9Q62018 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms