Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clns1aQ61189 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.91□□□□□ -0.02
Clns1aQ61189 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Clns1aQ61189 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Clns1aQ61189 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Clns1aQ61189 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.9□□□□□ -0.02
Clns1aQ61189 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Clns1aQ61189 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Clns1aQ61189 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.9□□□□□ -0.02
Clns1aQ61189 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Clns1aQ61189 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Clns1aQ61189 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Gm26833-201ENSMUST00000180899 440 ntBASIC14.89□□□□□ -0.03
Clns1aQ61189 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clns1aQ61189 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Clns1aQ61189 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.88□□□□□ -0.03
Clns1aQ61189 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.88□□□□□ -0.03
Clns1aQ61189 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clns1aQ61189 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Clns1aQ61189 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clns1aQ61189 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms