Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sim2Q61079 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Actl10-202ENSMUST00000226583 1501 ntBASIC16.93■□□□□ 0.3
Sim2Q61079 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Sim2Q61079 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.93■□□□□ 0.3
Sim2Q61079 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.93■□□□□ 0.3
Sim2Q61079 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.93■□□□□ 0.3
Sim2Q61079 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sim2Q61079 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sim2Q61079 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Gm18733-201ENSMUST00000173950 856 ntBASIC16.92■□□□□ 0.3
Sim2Q61079 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.92■□□□□ 0.3
Sim2Q61079 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.92■□□□□ 0.3
Sim2Q61079 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.92■□□□□ 0.3
Sim2Q61079 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sim2Q61079 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sim2Q61079 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.91■□□□□ 0.3
Sim2Q61079 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.91■□□□□ 0.3
Sim2Q61079 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Sim2Q61079 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sim2Q61079 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sim2Q61079 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.9■□□□□ 0.3
Sim2Q61079 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.9■□□□□ 0.3
Sim2Q61079 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.9■□□□□ 0.3
Sim2Q61079 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sim2Q61079 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sim2Q61079 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sim2Q61079 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.89■□□□□ 0.3
Sim2Q61079 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sim2Q61079 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Sim2Q61079 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Sim2Q61079 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.89■□□□□ 0.29
Sim2Q61079 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.89■□□□□ 0.29
Sim2Q61079 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sim2Q61079 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Sim2Q61079 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.88■□□□□ 0.29
Sim2Q61079 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sim2Q61079 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms