Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.79■□□□□ 0.44
Slc6a4Q60857 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc6a4Q60857 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Gm7370-201ENSMUST00000219471 767 ntBASIC17.78■□□□□ 0.44
Slc6a4Q60857 Gm18032-201ENSMUST00000222541 538 ntBASIC17.78■□□□□ 0.44
Slc6a4Q60857 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.78■□□□□ 0.44
Slc6a4Q60857 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc6a4Q60857 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.77■□□□□ 0.44
Slc6a4Q60857 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc6a4Q60857 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc6a4Q60857 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.76■□□□□ 0.43
Slc6a4Q60857 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
Slc6a4Q60857 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Gm16061-201ENSMUST00000122167 857 ntBASIC17.75■□□□□ 0.43
Slc6a4Q60857 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.75■□□□□ 0.43
Slc6a4Q60857 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc6a4Q60857 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slc6a4Q60857 Gm6659-201ENSMUST00000174752 547 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms