Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Gm43799-201ENSMUST00000201845 579 ntBASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.32■□□□□ 0.2
Tnfaip3Q60769 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfaip3Q60769 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Gm27463-201ENSMUST00000183569 57 ntBASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.3■□□□□ 0.2
Tnfaip3Q60769 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfaip3Q60769 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Gm6433-201ENSMUST00000118634 875 ntBASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Tnfaip3Q60769 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Gm11539-201ENSMUST00000119837 557 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Gm13436-201ENSMUST00000120418 567 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Gm13559-201ENSMUST00000120476 863 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Gm13836-201ENSMUST00000121159 501 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Mir8112-201ENSMUST00000184382 131 ntBASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfaip3Q60769 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms