Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Atp13a4Q5XF90 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Gm715-201ENSMUST00000117865 831 ntBASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Gm12085-201ENSMUST00000119263 940 ntBASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp13a4Q5XF90 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp13a4Q5XF90 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp13a4Q5XF90 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp13a4Q5XF90 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp13a4Q5XF90 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms