Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Ubr3Q5U430 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Mir5131-201ENSMUST00000175426 93 ntBASIC21.13■□□□□ 0.97
Ubr3Q5U430 Gm44450-201ENSMUST00000199528 114 ntBASIC21.13■□□□□ 0.97
Ubr3Q5U430 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.13■□□□□ 0.97
Ubr3Q5U430 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubr3Q5U430 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.12■□□□□ 0.97
Ubr3Q5U430 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubr3Q5U430 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubr3Q5U430 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubr3Q5U430 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ubr3Q5U430 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Rprl3-201ENSMUST00000157400 290 ntBASIC21.09■□□□□ 0.97
Ubr3Q5U430 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr3Q5U430 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubr3Q5U430 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Ubr3Q5U430 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ubr3Q5U430 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr3Q5U430 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr3Q5U430 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.08■□□□□ 0.96
Ubr3Q5U430 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.08■□□□□ 0.96
Ubr3Q5U430 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr3Q5U430 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr3Q5U430 Gm1401-201ENSMUST00000122048 772 ntBASIC21.07■□□□□ 0.96
Ubr3Q5U430 Gm27867-201ENSMUST00000184778 125 ntBASIC21.07■□□□□ 0.96
Ubr3Q5U430 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr3Q5U430 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ubr3Q5U430 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr3Q5U430 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms