Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Mir5133-201ENSMUST00000174955 77 ntBASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav7d-3Q5R1I1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav7d-3Q5R1I1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp783-201ENSMUST00000095946 670 ntBASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7d-3Q5R1I1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Gm29791-202ENSMUST00000207888 369 ntBASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7d-3Q5R1I1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Rab3c-203ENSMUST00000224180 967 ntBASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7d-3Q5R1I1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7d-3Q5R1I1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms