Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Mir8112-201ENSMUST00000184382 131 ntBASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6d-4Q5R1I0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-4Q5R1I0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6d-4Q5R1I0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Gm7889-201ENSMUST00000185591 958 ntBASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.59□□□□□ -0.07
Trav6d-4Q5R1I0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-4Q5R1I0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6d-4Q5R1I0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Gm37025-201ENSMUST00000195159 829 ntBASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6d-4Q5R1I0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms