Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-4Q5R1H9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Golgb1-201ENSMUST00000023534 498 ntBASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-4Q5R1H9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-4Q5R1H9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav7d-4Q5R1H9 Gm38205-201ENSMUST00000192243 258 ntBASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav7d-4Q5R1H9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-4Q5R1H9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Gm5812-201ENSMUST00000061073 957 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms