Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm43017-201ENSMUST00000198296 752 ntBASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm27454-201ENSMUST00000185090 204 ntBASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Mir8112-201ENSMUST00000184382 131 ntBASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav15-1-dv6-1Q5R1D2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav15-1-dv6-1Q5R1D2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms