Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trdv4Q5R1A3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Gm18025-201ENSMUST00000221733 862 ntBASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdv4Q5R1A3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Gm6576-201ENSMUST00000169678 883 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Gm42545-201ENSMUST00000202755 922 ntBASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trdv4Q5R1A3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trdv4Q5R1A3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trdv4Q5R1A3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trdv4Q5R1A3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trdv4Q5R1A3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdv4Q5R1A3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.32□□□□□ -0.12
Trdv4Q5R1A3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms