Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps13aQ5H8C4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps13aQ5H8C4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.27■□□□□ 0.36
Vps13aQ5H8C4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps13aQ5H8C4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vps13aQ5H8C4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Gm5186-201ENSMUST00000218781 920 ntBASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vps13aQ5H8C4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vps13aQ5H8C4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Gm10576-201ENSMUST00000191927 825 ntBASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Psmb5-202ENSMUST00000227257 622 ntBASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Gm15467-201ENSMUST00000120582 445 ntBASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.24■□□□□ 0.35
Vps13aQ5H8C4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Gm7862-201ENSMUST00000121461 292 ntBASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps13aQ5H8C4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps13aQ5H8C4 Iqck-206ENSMUST00000208658 2891 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms